1k1RG Database Training Workshop

The 4-Day Database Training Workshop is designed to build technical capacity among researchers and developers for Activity 5: Implementation of the Philippine Rice Genome Database (PH Rice GDB) under the 1k1 Rice Genome Project. This training integrates foundational database concepts, system architectures, and practical data handling workflows relevant to genomic information management.

Day 1: Understanding Activity 5 of the 1,001 Rice Genome Project

Provides an overview of the scientific foundation, objectives, and implementation strategy of the 1k1 Rice Genome Project, highlighting Activity 5 and the development of the Philippine Rice Genome Database.

By Arian Jacildo

Day 2: Foundations for the Development of Activity 5

Introduces the architectures of SNP-MERN and SNP-Spring and covers fundamental concepts in databases relevant to the development of the PH Rice GDB.

By G

Day 3: Exploring the SNP-Seek Database Schema and Data Loading Workflow

Examines the core structure and relationships within the SNP-Seek database and demonstrates how genomic data are loaded into the system.

By Lord Hendrix Barboza

Day 4: Data Preparation Pipeline for SNP-Seek

Explains the workflow for transforming genomic datasets, including the conversion of VCF files into HDF5 formats for integration into the database.

By Riza May Pasco